Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs9624290 chr22:24028190 T/C IGLL3 chr22:25713888-25716191:+ 0.72 10.48 2.94E-23 Box Plot
THCA rs9624291 chr22:24028351 T/C IGLL3 chr22:25713888-25716191:+ 0.73 10.44 4.13E-23 Box Plot
THCA rs962555 chr2:101067798 C/G LOC285359 chr3:101431278-101432259:+ 0.35 8.02 8.28E-15 Box Plot
THCA rs962556 chr2:101067818 C/T LOC285359 chr3:101431278-101432259:+ 0.35 8.03 7.82E-15 Box Plot
THCA rs9627749 chr22:49978023 A/G C22orf30 chr22:32072242-32146120:- 0.46 6.3 6.77E-10 Box Plot
THCA rs9627749 chr22:49978023 A/G EIF4ENIF1 chr22:31832963-31892094:- 0.59 5.96 4.93E-9 Box Plot
THCA rs9627749 chr22:49978023 A/G EP300 chr22:41487790-41576083:+ 0.45 6.45 2.76E-10 Box Plot
THCA rs9630225 chr11:77675723 G/A INTS4L1 chr7:64601603-64694600:+ 0.71 11.54 2.49E-27 Box Plot
THCA rs963571 chr2:101063893 A/G LOC285359 chr3:101431278-101432259:+ 0.35 6.63 9.34E-11 Box Plot
THCA rs9638227 chr7:65090608 A/C RABGEF1 chr7:66147151-66276451:+ -0.49 -9.36 3.06E-19 Box Plot
THCA rs964559 chr2:101121719 A/G LOC285359 chr3:101431278-101432259:+ 0.35 8.03 7.43E-15 Box Plot
THCA rs9646943 chr2:101202906 T/G LOC285359 chr3:101431278-101432259:+ 0.27 6.01 3.64E-9 Box Plot
THCA rs9647031 chr20:1367535 C/T FKBP1AP1 chr19:58337829-58338146:- -0.58 -7.43 4.92E-13 Box Plot
THCA rs9648837 chr7:140135118 G/T LOC441455 chr9:99488103-99489749:+ 0.52 6.86 2.1E-11 Box Plot
THCA rs9650622 chr8:9804292 G/T SGK223 chr8:8175258-8244008:- 0.4 7.6 1.54E-13 Box Plot